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Emacs opens files with wrong line end encoding

Whenever I open a file encoded with dos end lines, Emacs decides it's encoded in undecided_linux and displays ^M after each line. I checked, those files all have matching newline characters (no odd ^...
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Remove the suffix `^M` when run ls in org src

When run ls to print the file list #+begin_src ipython :session sql :results output ! ls | head -n 5 #+end_src #+RESULTS: : create.txt^M : Lesson 10. Grouping Data.md^M : Lesson 11. Working with ...